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authorship_ai_confidentiality.md

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1# Authorship, CRediT, AI, and Confidentiality
2

Authorship, CRediT, AI, and Confidentiality

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3## Human authorship and accountability
4
5Use the current target-journal authorship policy. For biomedical work, ICMJE's four
6criteria require substantial contribution, drafting or critical revision, final
7approval, and accountability for all aspects of the work [SW-S01].
8
9AI systems and other nonhuman tools are not authors. They cannot approve the work,
10accept accountability, disclose conflicts, or manage copyright and license agreements
11[SW-S01, SW-S03].
13Do not:
15- add or remove an author without all required human approvals;
16- infer contributions from author order, affiliations, or email;
17- generate an author-contribution statement from incomplete records;
18- use CRediT roles as a substitute for the venue's authorship criteria.

Human authorship and accountability

Use the current target-journal authorship policy. For biomedical work, ICMJE's four criteria require substantial contribution, drafting or critical revision, final approval, and accountability for all aspects of the work [SW-S01].

AI systems and other nonhuman tools are not authors. They cannot approve the work, accept accountability, disclose conflicts, or manage copyright and license agreements [SW-S01, SW-S03].

Do not:

  • add or remove an author without all required human approvals;
  • infer contributions from author order, affiliations, or email;
  • generate an author-contribution statement from incomplete records;
  • use CRediT roles as a substitute for the venue's authorship criteria.
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20## CRediT
22CRediT is the ANSI/NISO Z39.104-2022 taxonomy of 14 contributor roles. The standard
23explicitly describes contributions and does not define authorship [SW-S19].
25Record only roles confirmed by the contributor and accountable author team:
27- Conceptualization
28- Data curation
29- Formal analysis
30- Funding acquisition
31- Investigation
32- Methodology
33- Project administration
34- Resources
35- Software
36- Supervision
37- Validation
38- Visualization
39- Writing – original draft
40- Writing – review & editing
42One person may have multiple roles; a project need not use every role. Non-author
43contributors may also receive appropriate credit and acknowledgment subject to consent
44and journal policy.

CRediT

CRediT is the ANSI/NISO Z39.104-2022 taxonomy of 14 contributor roles. The standard explicitly describes contributions and does not define authorship [SW-S19].

Record only roles confirmed by the contributor and accountable author team:

  • Conceptualization
  • Data curation
  • Formal analysis
  • Funding acquisition
  • Investigation
  • Methodology
  • Project administration
  • Resources
  • Software
  • Supervision
  • Validation
  • Visualization
  • Writing – original draft
  • Writing – review & editing

One person may have multiple roles; a project need not use every role. Non-author contributors may also receive appropriate credit and acknowledgment subject to consent and journal policy.

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46## AI-use disclosure
48The January 2026 ICMJE Recommendations call for disclosure of the AI tool and purpose
49in the cover letter and appropriate manuscript section. Writing assistance belongs
50in acknowledgments; use for data collection, analysis, or figure generation belongs
51in Methods as applicable
52[SW-S01, SW-S02]. COPE's formal position likewise requires disclosure and keeps full
53responsibility with human authors [SW-S03].
55Journal and publisher rules differ and evolve. Check them at the time of use and again
56before submission. Record:
58- tool, provider, and version or access date;
59- purpose and affected stage;
60- whether output entered text, code, analysis, tables, or figures;
61- human verification performed;
62- disclosure locations required by the venue;
63- what material, if any, was sent outside the approved environment;
64- authorization and policy review for any restricted transfer.
66Do not fabricate an AI-use statement or claim that no AI was used. Obtain confirmation
67from the human authors.

AI-use disclosure

The January 2026 ICMJE Recommendations call for disclosure of the AI tool and purpose in the cover letter and appropriate manuscript section. Writing assistance belongs in acknowledgments; use for data collection, analysis, or figure generation belongs in Methods as applicable [SW-S01, SW-S02]. COPE's formal position likewise requires disclosure and keeps full responsibility with human authors [SW-S03].

Journal and publisher rules differ and evolve. Check them at the time of use and again before submission. Record:

  • tool, provider, and version or access date;
  • purpose and affected stage;
  • whether output entered text, code, analysis, tables, or figures;
  • human verification performed;
  • disclosure locations required by the venue;
  • what material, if any, was sent outside the approved environment;
  • authorization and policy review for any restricted transfer.

Do not fabricate an AI-use statement or claim that no AI was used. Obtain confirmation from the human authors.

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69## Confidentiality boundary
71Do not send any of the following to an external service without explicit authorization
72and a documented policy review:
74- unpublished manuscripts or drafts;
75- peer-review or editorial material;
76- sensitive or restricted data;
77- protected health information or other personal data;
78- proprietary or contract-restricted content;
79- source documents, including full articles, reports, protocols, and datasets.
81Authorization must come from a person or body empowered to grant it and must be
82consistent with journal policy, consent, ethics approval, contracts, law, institutional
83policy, and data-use terms. Removing obvious names does not by itself make content safe.
85When authorization is absent or unclear, keep processing local and use only minimal
86metadata. This skill's bundled tools make no network calls and do not read environment
87variables or `.env` files.
89ICMJE treats submitted manuscripts as privileged communications and warns editors and
90reviewers not to upload them to AI systems where confidentiality cannot be assured
91without author permission [SW-S01]. JAMA provides a journal-policy example with the same
92confidentiality concern [SW-S24].

Confidentiality boundary

Do not send any of the following to an external service without explicit authorization and a documented policy review:

  • unpublished manuscripts or drafts;
  • peer-review or editorial material;
  • sensitive or restricted data;
  • protected health information or other personal data;
  • proprietary or contract-restricted content;
  • source documents, including full articles, reports, protocols, and datasets.

Authorization must come from a person or body empowered to grant it and must be consistent with journal policy, consent, ethics approval, contracts, law, institutional policy, and data-use terms. Removing obvious names does not by itself make content safe.

When authorization is absent or unclear, keep processing local and use only minimal metadata. This skill's bundled tools make no network calls and do not read environment variables or .env files.

ICMJE treats submitted manuscripts as privileged communications and warns editors and reviewers not to upload them to AI systems where confidentiality cannot be assured without author permission [SW-S01]. JAMA provides a journal-policy example with the same confidentiality concern [SW-S24].

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94## COPE status as of the research date
96COPE's 2017 Core Practices were retired in 2024. The Code of Conduct for COPE
97Members was published on 21 July 2026, with 12 months from first publication for
98implementation. It sits alongside the 2026 Core Principles [SW-S04, SW-S05]. Use
99current topic-specific guidance; distinguish formal positions from discussion
100documents, webinars, comments, and case advice.

COPE status as of the research date

COPE's 2017 Core Practices were retired in 2024. The Code of Conduct for COPE Members was published on 21 July 2026, with 12 months from first publication for implementation. It sits alongside the 2026 Core Principles [SW-S04, SW-S05]. Use current topic-specific guidance; distinguish formal positions from discussion documents, webinars, comments, and case advice.

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102## Validation
104Populate `authorship.json`, then run:
106```bash
107python3 scripts/validate_authorship.py authorship.json
108```
110The validator checks human authorship gates, exact CRediT role names, guarantors, final
111approval, declaration-hash syntax, AI disclosure, and restricted external-transfer
112gates. It does not compare declaration hashes against manuscript statements.
113These are ICMJE-style local gates, not a universal authorship standard. For example,
114Nature Portfolio uses a different contribution criterion [SW-S23]. The guarantor
115record is a local accountability convention, not a claim that all journals require
116one. Do not falsely attest to a gate to pass the tool; document the actual venue
117criteria and any local-validator limitation. The tool cannot adjudicate contribution
118disputes or determine who deserves authorship.

Validation

Populate authorship.json, then run:

python3 scripts/validate_authorship.py authorship.json

The validator checks human authorship gates, exact CRediT role names, guarantors, final approval, declaration-hash syntax, AI disclosure, and restricted external-transfer gates. It does not compare declaration hashes against manuscript statements. These are ICMJE-style local gates, not a universal authorship standard. For example, Nature Portfolio uses a different contribution criterion [SW-S23]. The guarantor record is a local accountability convention, not a claim that all journals require one. Do not falsely attest to a gate to pass the tool; document the actual venue criteria and any local-validator limitation. The tool cannot adjudicate contribution disputes or determine who deserves authorship.

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Runs code python3 scripts/validate_authorship.py :107