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ecoli-minibinder-expression-histag-a280.md

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1# E. coli Minibinder Expression with His-tag Purification and Yield via A280
2
3**URL:** https://cloud.ginkgo.bio/protocols/ecoli-minibinder-expression-histag-a280
4**Service terms:** https://cloud.ginkgo.bio/terms/ecoli-minibinder-histag-a280
5**Reviewed:** 2026-09-30; prices and turnaround below are catalog estimates.
6**Status:** Ginkgo Certified
7**Price:** $199/sample
8**Turnaround:** up to 3 weeks
9**Throughput:** Up to 96 constructs in parallel

E. coli Minibinder Expression with His-tag Purification and Yield via A280

URL: https://cloud.ginkgo.bio/protocols/ecoli-minibinder-expression-histag-a280 Service terms: https://cloud.ginkgo.bio/terms/ecoli-minibinder-histag-a280 Reviewed: 2026-09-30; prices and turnaround below are catalog estimates. Status: Ginkgo Certified Price: $199/sample Turnaround: up to 3 weeks Throughput: Up to 96 constructs in parallel

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11## Overview
13Fully automated, end-to-end service that takes designed minibinder candidates from heat shock transformation through bacterial expression, cell lysis, magnetic His-tag (IMAC) bead purification, and quantitative yield measurement by A280 absorbance - built to screen binder designs before scale-up. Instruments include the Agilent Bravo 96/384, BioTek MultiFlo, Inheco and Cytomat incubators, and a Spark plate reader.

Overview

Fully automated, end-to-end service that takes designed minibinder candidates from heat shock transformation through bacterial expression, cell lysis, magnetic His-tag (IMAC) bead purification, and quantitative yield measurement by A280 absorbance - built to screen binder designs before scale-up. Instruments include the Agilent Bravo 96/384, BioTek MultiFlo, Inheco and Cytomat incubators, and a Spark plate reader.

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15## Input
17- **Minibinder input:** AA or DNA sequence in CSV as specified by the intake text; the download is an E. coli `.xlsx` template. Inspect the current template and retain the requested fields when exporting.
18- **His-tag orientation:** N-terminal or C-terminal fusion; linker sequence (default GGGS if unspecified)
19- **Known expression notes:** Disulfide bonds, cofactor requirements, toxicity concerns, or PTM needs

Input

  • Minibinder input: AA or DNA sequence in CSV as specified by the intake text; the download is an E. coli .xlsx template. Inspect the current template and retain the requested fields when exporting.
  • His-tag orientation: N-terminal or C-terminal fusion; linker sequence (default GGGS if unspecified)
  • Known expression notes: Disulfide bonds, cofactor requirements, toxicity concerns, or PTM needs
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21## Output
23- **Yield Quantification:** A280 per well, converted to protein concentration (mg/mL) via the protein's molar extinction coefficient
24- **Expression Confirmation:** Fluorescence signal relative to controls
25- **OD culture growth data** reported per construct
26- **Assay Quality Metrics:** Per-run quality summary with plate-level controls
27- QC-flagged PDF results report plus downloadable raw CSV files

Output

  • Yield Quantification: A280 per well, converted to protein concentration (mg/mL) via the protein's molar extinction coefficient
  • Expression Confirmation: Fluorescence signal relative to controls
  • OD culture growth data reported per construct
  • Assay Quality Metrics: Per-run quality summary with plate-level controls
  • QC-flagged PDF results report plus downloadable raw CSV files
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29## Automated Workflow
31Four phases coordinated across automated instruments:

Automated Workflow

Four phases coordinated across automated instruments:

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33### Phase 1 - Transformation & Heat Shock Recovery
351. Pre-chill ATC (Inheco ATC 384)
362. Heat shock & cycle (Inheco ATC 384)
373. Add LB recovery media (Agilent Bravo 384)
384. Recovery incubation (Inheco)

Phase 1 - Transformation & Heat Shock Recovery

  1. Pre-chill ATC (Inheco ATC 384)
  2. Heat shock & cycle (Inheco ATC 384)
  3. Add LB recovery media (Agilent Bravo 384)
  4. Recovery incubation (Inheco)
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40### Phase 2 - Culture Growth & Harvest

Phase 2 - Culture Growth & Harvest

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42### Phase 3 - Cell Lysis & Clarification

Phase 3 - Cell Lysis & Clarification

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44### Phase 4 - His-tag Purification & A280 Yield
461. Dispense PBS (BioTek MultiFlo)
472. Load sample onto beads (Agilent Bravo 96)
483. Binding incubation (Bioshake)
494. Wash beads (Agilent Bravo 96)
505. Elute protein (Agilent Bravo 96)
516. Read A280 (Agilent Bravo 96 + Spark)

Phase 4 - His-tag Purification & A280 Yield

  1. Dispense PBS (BioTek MultiFlo)
  2. Load sample onto beads (Agilent Bravo 96)
  3. Binding incubation (Bioshake)
  4. Wash beads (Agilent Bravo 96)
  5. Elute protein (Agilent Bravo 96)
  6. Read A280 (Agilent Bravo 96 + Spark)
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53## Ordering
55- **Number of Proteins:** configurable
56- **Number of Replicates:** configurable
57- **File Upload:** CSV, Excel, FASTA, TXT, PDF, ZIP
58- **Additional Details:** free-text field for special requirements

Ordering

  • Number of Proteins: configurable
  • Number of Replicates: configurable
  • File Upload: CSV, Excel, FASTA, TXT, PDF, ZIP
  • Additional Details: free-text field for special requirements
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60## Use Cases
62- Screening designed minibinder/binder candidates in E. coli before scale-up
63- Parallel yield comparison across up to 96 binder designs
64- Producing His-tagged binders for downstream characterization

Use Cases

  • Screening designed minibinder/binder candidates in E. coli before scale-up
  • Parallel yield comparison across up to 96 binder designs
  • Producing His-tagged binders for downstream characterization
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