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sources.md

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1# Official Source Ledger
2
3**Research cutoff and access date:** 2026-09-30
4**Method:** live official-page/PDF review, with public-page extraction for ACR and BMJ when direct access was blocked. Local scripts, templates, and synthetic tests were audited separately; this skill has no network API client, authentication, pagination, or submission implementation to test.
5**Use:** source routing and version awareness only. Always verify the live source, jurisdictional adoption, and local requirements before real-world use.
6

Official Source Ledger

Research cutoff and access date: 2026-09-30 Method: live official-page/PDF review, with public-page extraction for ACR and BMJ when direct access was blocked. Local scripts, templates, and synthetic tests were audited separately; this skill has no network API client, authentication, pagination, or submission implementation to test. Use: source routing and version awareness only. Always verify the live source, jurisdictional adoption, and local requirements before real-world use.

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7## Case reports
8
9- **CARE Case Report Guidelines — home and current toolkit.** Identifies the 2013 checklist and 2017 explanation. <https://www.care-statement.org/>
10- **2013 CARE Checklist.** Thirteen main reporting items. <https://www.care-statement.org/checklist>
11- **CARE publications.** Primary 2013 statement and 2017 explanation/elaboration references. <https://www.care-statement.org/publications>

Case reports

  • CARE Case Report Guidelines — home and current toolkit. Identifies the 2013 checklist and 2017 explanation. <https://www.care-statement.org/>
  • 2013 CARE Checklist. Thirteen main reporting items. <https://www.care-statement.org/checklist>
  • CARE publications. Primary 2013 statement and 2017 explanation/elaboration references. <https://www.care-statement.org/publications>
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13## Randomized-trial protocols and results
15- **SPIRIT–CONSORT official site.** SPIRIT 2025: 34-item protocol checklist and figure. CONSORT 2025: 30-item results checklist and flow diagram. <https://www.consort-spirit.org/>
16- **CONSORT/SPIRIT extension catalogue.** Current design, data, intervention, and population extensions; catalogue notes which base statement each extension used. <https://www.consort-spirit.org/extensions>
17- **CONSORT 2025 primary statement.** Published 2025-04-14. <https://www.bmj.com/content/389/bmj-2024-081123>
18- **SPIRIT 2025 primary statement.** Published 2025-04-28; states that SPIRIT 2025 supersedes SPIRIT 2013. <https://www.bmj.com/content/389/bmj-2024-081477>
19- **SPIRIT 2025 explanation and elaboration.** Published 2025-04-28. <https://www.bmj.com/content/389/bmj-2024-081660>

Randomized-trial protocols and results

  • SPIRIT–CONSORT official site. SPIRIT 2025: 34-item protocol checklist and figure. CONSORT 2025: 30-item results checklist and flow diagram. <https://www.consort-spirit.org/>
  • CONSORT/SPIRIT extension catalogue. Current design, data, intervention, and population extensions; catalogue notes which base statement each extension used. <https://www.consort-spirit.org/extensions>
  • CONSORT 2025 primary statement. Published 2025-04-14. <https://www.bmj.com/content/389/bmj-2024-081123>
  • SPIRIT 2025 primary statement. Published 2025-04-28; states that SPIRIT 2025 supersedes SPIRIT 2013. <https://www.bmj.com/content/389/bmj-2024-081477>
  • SPIRIT 2025 explanation and elaboration. Published 2025-04-28. <https://www.bmj.com/content/389/bmj-2024-081660>
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21## ICH clinical-study and GCP guidance
23- **ICH E3 — Structure and Content of Clinical Study Reports.** Step 4, 1995-11-30. <https://database.ich.org/sites/default/files/E3_Guideline.pdf>
24- **ICH E3 Questions & Answers (R1).** Current version dated 2012-07-06; clarifies that E3 is adaptable guidance, not a rigid template. <https://database.ich.org/sites/default/files/E3_Q%26As_R1_Q%26As.pdf>
25- **ICH E6(R3) consolidated final guideline.** Principles, Annex 1, and Annex 2; adopted 2026-06-16. <https://database.ich.org/sites/default/files/ICH%20E6%28R3%29_Step4_FinalConsolidatedGuideline_2026_0616_.pdf>
26- **ICH E6(R3) Annex 2 final.** Adopted 2026-06-03. <https://database.ich.org/sites/default/files/ICH_E6%28R3%29_Annex%202_Guideline_Step%204_2026_0603_0.pdf>
27- **FDA ICH guidance index.** General US ICH entry point; its E6 text still describes R2, so it is not sufficient evidence of current regional E6 adoption. <https://www.fda.gov/science-research/clinical-trials-and-human-subject-protection/ich-guidance-documents>
28- **FDA E6(R3) Good Clinical Practice.** Dedicated final-guidance page, September 2025; review the actual regional document and Annex 2 status separately from the ICH consolidated version. <https://www.fda.gov/regulatory-information/search-fda-guidance-documents/e6r3-good-clinical-practice-gcp>

ICH clinical-study and GCP guidance

  • ICH E3 — Structure and Content of Clinical Study Reports. Step 4, 1995-11-30. <https://database.ich.org/sites/default/files/E3_Guideline.pdf>
  • ICH E3 Questions & Answers (R1). Current version dated 2012-07-06; clarifies that E3 is adaptable guidance, not a rigid template. <https://database.ich.org/sites/default/files/E3_Q%26As_R1_Q%26As.pdf>
  • ICH E6(R3) consolidated final guideline. Principles, Annex 1, and Annex 2; adopted 2026-06-16. <https://database.ich.org/sites/default/files/ICH%20E6%28R3%29_Step4_FinalConsolidatedGuideline_2026_0616_.pdf>
  • ICH E6(R3) Annex 2 final. Adopted 2026-06-03. <https://database.ich.org/sites/default/files/ICH_E6%28R3%29_Annex%202_Guideline_Step%204_2026_0603_0.pdf>
  • FDA ICH guidance index. General US ICH entry point; its E6 text still describes R2, so it is not sufficient evidence of current regional E6 adoption. <https://www.fda.gov/science-research/clinical-trials-and-human-subject-protection/ich-guidance-documents>
  • FDA E6(R3) Good Clinical Practice. Dedicated final-guidance page, September 2025; review the actual regional document and Annex 2 status separately from the ICH consolidated version. <https://www.fda.gov/regulatory-information/search-fda-guidance-documents/e6r3-good-clinical-practice-gcp>
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30## Safety reporting
32- **ICH E2A — Clinical Safety Data Management: Definitions and Standards for Expedited Reporting.** Step 4, 1994-10-27. <https://database.ich.org/sites/default/files/E2A_Guideline.pdf>
33- **ICH E2B(R3) ICSR specification and related files.** Catalogue entry point for implementation guide, Q&As, and code lists; current file list could not be extracted during this review. <https://www.ich.org/page/e2br3-individual-case-safety-report-icsr-specification-and-related-files>
34- **FDA E2B(R3) implementation guide.** Final April 2022 adoption page with ICH message specification, XML schemas, examples, and FDA regional additions. No message generation or transmission is performed here. <https://www.fda.gov/regulatory-information/search-fda-guidance-documents/e2br3-electronic-transmission-individual-case-safety-reports-implementation-guide-data-elements-and>
35- **ICH E2C(R2) PBRER.** Final Step 4 text corrected 2012-12-17; periodic benefit-risk aggregate reporting, distinct from ICSR message structure. <https://database.ich.org/sites/default/files/E2C_R2_Guideline.pdf>
36- **ICH E2D(R1) — Post-Approval Safety Data: Definitions and Standards for Management and Reporting of Individual Case Safety Reports.** Adopted 2025-09-15. <https://database.ich.org/sites/default/files/ICH_E2D%28R1%29_Step4_FinalGuideline_2025_0819.pdf>
37- **21 CFR 312.32 — IND safety reporting.** Current eCFR text; verify current effective text and official annual CFR. <https://www.ecfr.gov/current/title-21/chapter-I/subchapter-D/part-312/subpart-B/section-312.32>
38- **FDA IND Application Reporting: IND Safety Reports.** Checked 2026-09-30; includes AEMS/E2B(R3) electronic route effective 2026-04-01 within stated scope. <https://www.fda.gov/drugs/investigational-new-drug-application-ind/ind-application-reporting-ind-safety-reports>
39- **FDA AEMS Electronic Submissions.** Postmarketing E2B(R2) transition ends 2026-09-30; ESG NextGen ICSRs require E2B(R3) from 2026-10-01. SRP users need no action for this transition. <https://www.fda.gov/drugs/fda-adverse-event-monitoring-system-aems/fda-adverse-event-monitoring-system-aems-electronic-submissions>
40- **FDA Sponsor Responsibilities — Safety Reporting Requirements and Safety Assessment for IND and BA/BE Studies.** Final guidance, December 2025. <https://www.fda.gov/regulatory-information/search-fda-guidance-documents/sponsor-responsibilities-safety-reporting-requirements-and-safety-assessment-ind-and>
41- **FDA Investigator Responsibilities — Safety Reporting for Investigational Drugs and Devices.** Final guidance, December 2025. <https://www.fda.gov/regulatory-information/search-fda-guidance-documents/investigator-responsibilities-safety-reporting-investigational-drugs-and-devices>
42- **FDA Postmarketing Adverse Event Reporting Compliance Program.** Current inspection-program scope, distinct from individual event reportability. <https://www.fda.gov/drugs/surveillance-post-drug-approval-activities/postmarketing-adverse-event-reporting-compliance-program>

Safety reporting

  • ICH E2A — Clinical Safety Data Management: Definitions and Standards for Expedited Reporting. Step 4, 1994-10-27. <https://database.ich.org/sites/default/files/E2A_Guideline.pdf>
  • ICH E2B(R3) ICSR specification and related files. Catalogue entry point for implementation guide, Q&As, and code lists; current file list could not be extracted during this review. <https://www.ich.org/page/e2br3-individual-case-safety-report-icsr-specification-and-related-files>
  • FDA E2B(R3) implementation guide. Final April 2022 adoption page with ICH message specification, XML schemas, examples, and FDA regional additions. No message generation or transmission is performed here. <https://www.fda.gov/regulatory-information/search-fda-guidance-documents/e2br3-electronic-transmission-individual-case-safety-reports-implementation-guide-data-elements-and>
  • ICH E2C(R2) PBRER. Final Step 4 text corrected 2012-12-17; periodic benefit-risk aggregate reporting, distinct from ICSR message structure. <https://database.ich.org/sites/default/files/E2C_R2_Guideline.pdf>
  • ICH E2D(R1) — Post-Approval Safety Data: Definitions and Standards for Management and Reporting of Individual Case Safety Reports. Adopted 2025-09-15. <https://database.ich.org/sites/default/files/ICH_E2D%28R1%29_Step4_FinalGuideline_2025_0819.pdf>
  • 21 CFR 312.32 — IND safety reporting. Current eCFR text; verify current effective text and official annual CFR. <https://www.ecfr.gov/current/title-21/chapter-I/subchapter-D/part-312/subpart-B/section-312.32>
  • FDA IND Application Reporting: IND Safety Reports. Checked 2026-09-30; includes AEMS/E2B(R3) electronic route effective 2026-04-01 within stated scope. <https://www.fda.gov/drugs/investigational-new-drug-application-ind/ind-application-reporting-ind-safety-reports>
  • FDA AEMS Electronic Submissions. Postmarketing E2B(R2) transition ends 2026-09-30; ESG NextGen ICSRs require E2B(R3) from 2026-10-01. SRP users need no action for this transition. <https://www.fda.gov/drugs/fda-adverse-event-monitoring-system-aems/fda-adverse-event-monitoring-system-aems-electronic-submissions>
  • FDA Sponsor Responsibilities — Safety Reporting Requirements and Safety Assessment for IND and BA/BE Studies. Final guidance, December 2025. <https://www.fda.gov/regulatory-information/search-fda-guidance-documents/sponsor-responsibilities-safety-reporting-requirements-and-safety-assessment-ind-and>
  • FDA Investigator Responsibilities — Safety Reporting for Investigational Drugs and Devices. Final guidance, December 2025. <https://www.fda.gov/regulatory-information/search-fda-guidance-documents/investigator-responsibilities-safety-reporting-investigational-drugs-and-devices>
  • FDA Postmarketing Adverse Event Reporting Compliance Program. Current inspection-program scope, distinct from individual event reportability. <https://www.fda.gov/drugs/surveillance-post-drug-approval-activities/postmarketing-adverse-event-reporting-compliance-program>
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44## Privacy and de-identification
46- **HHS Guidance Regarding Methods for De-identification of PHI.** Safe Harbor and Expert Determination under 45 CFR 164.514(b); including the limits on identifier-derived codes; public content rechecked. <https://www.hhs.gov/hipaa/for-professionals/special-topics/de-identification/index.html>
47- **HHS Minimum Necessary Requirement.** 45 CFR 164.502(b) and 164.514(d), scope and exceptions. <https://www.hhs.gov/hipaa/for-professionals/privacy/guidance/minimum-necessary-requirement/index.html>

Privacy and de-identification

  • HHS Guidance Regarding Methods for De-identification of PHI. Safe Harbor and Expert Determination under 45 CFR 164.514(b); including the limits on identifier-derived codes; public content rechecked. <https://www.hhs.gov/hipaa/for-professionals/special-topics/de-identification/index.html>
  • HHS Minimum Necessary Requirement. 45 CFR 164.502(b) and 164.514(d), scope and exceptions. <https://www.hhs.gov/hipaa/for-professionals/privacy/guidance/minimum-necessary-requirement/index.html>
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49## Diagnostic reporting
51- **ACR Practice Parameter for Communication of Diagnostic Imaging Findings.** Revised 2025 (Resolution 9). <https://gravitas.acr.org/PPTS/GetDocumentView?docId=74>
52- **ACR Practice Parameters & Technical Standards portal.** Current modality- and program-specific source. <https://gravitas.acr.org/PPTS>
53- **CAP Cancer Protocol Templates.** Current protocol downloads and 2026 change notices; updates to 14 protocols on 2026-09-16, including Vaginal Biopsy retirement. Biomarker protocols are guidance and not accreditation requirements. <https://www.cap.org/protocols-and-guidelines/cancer-protocols/current-cancer-protocols/>
54- **CAP Cancer Protocols.** Current scope and synoptic-reporting entry point. <https://www.cap.org/protocols-and-guidelines/cancer-reporting-tools/cancer-protocols>
55- **42 CFR 493.1291 — Test report.** CLIA postanalytic report requirements for applicable testing, including corrected-report handling. <https://www.ecfr.gov/current/title-42/chapter-IV/subchapter-G/part-493/subpart-K/subject-group-ECFR9482366886d579f/section-493.1291>
56- **42 CFR 493.1105 — Retention requirements.** Includes original, preliminary, final, and corrected-report retention provisions within scope. <https://www.ecfr.gov/current/title-42/chapter-IV/subchapter-G/part-493/subpart-J/section-493.1105>

Diagnostic reporting

  • ACR Practice Parameter for Communication of Diagnostic Imaging Findings. Revised 2025 (Resolution 9). <https://gravitas.acr.org/PPTS/GetDocumentView?docId=74>
  • ACR Practice Parameters & Technical Standards portal. Current modality- and program-specific source. <https://gravitas.acr.org/PPTS>
  • CAP Cancer Protocol Templates. Current protocol downloads and 2026 change notices; updates to 14 protocols on 2026-09-16, including Vaginal Biopsy retirement. Biomarker protocols are guidance and not accreditation requirements. <https://www.cap.org/protocols-and-guidelines/cancer-protocols/current-cancer-protocols/>
  • CAP Cancer Protocols. Current scope and synoptic-reporting entry point. <https://www.cap.org/protocols-and-guidelines/cancer-reporting-tools/cancer-protocols>
  • 42 CFR 493.1291 — Test report. CLIA postanalytic report requirements for applicable testing, including corrected-report handling. <https://www.ecfr.gov/current/title-42/chapter-IV/subchapter-G/part-493/subpart-K/subject-group-ECFR9482366886d579f/section-493.1291>
  • 42 CFR 493.1105 — Retention requirements. Includes original, preliminary, final, and corrected-report retention provisions within scope. <https://www.ecfr.gov/current/title-42/chapter-IV/subchapter-G/part-493/subpart-J/section-493.1105>
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58## Terminology
60- **ICH MedDRA.** Governance, purpose, and Points to Consider. <https://www.ich.org/page/meddra>
61- **MedDRA English support documentation.** Support-document entry point; page extraction did not reliably expose release listings, so version claims use the dated official PDF below. <https://www.meddra.org/how-to-use/support-documentation/english/welcome>
62- **MedDRA 29.1 Introductory Guide.** September 2026 release, hierarchy and multilingual-code context. <https://alt.meddra.org/files_acrobat/intguide_29_1_English.pdf>
63- **LOINC.** Version 2.83 released 2026-08-19. <https://loinc.org/> and <https://loinc.org/kb/loinc-release-notes>
64- **LOINC monthly release plan.** Targeted March 2027 launch; a future plan, not the current release cadence. <https://loinc.org/monthly>
65- **CDC ICD-10-CM release files.** FY26 April update service-date window and future FY27 effective date of 2026-10-01; do not equate downloadable with already applicable. <https://www.cdc.gov/nchs/icd/icd-10-cm/files.html>
66- **UCUM specification.** Formal grammar and semantics; the bundled regex is only a restricted character screen. <https://ucum.org/ucum>
67- **SNOMED International licensing.** Member/non-member use and licensing conditions. <https://www.snomed.org/licensing>
68- **NLM SNOMED CT licensing.** US distribution and licensing entry point. <https://www.nlm.nih.gov/healthit/snomedct/snomed_licensing.html>

Terminology

  • ICH MedDRA. Governance, purpose, and Points to Consider. <https://www.ich.org/page/meddra>
  • MedDRA English support documentation. Support-document entry point; page extraction did not reliably expose release listings, so version claims use the dated official PDF below. <https://www.meddra.org/how-to-use/support-documentation/english/welcome>
  • MedDRA 29.1 Introductory Guide. September 2026 release, hierarchy and multilingual-code context. <https://alt.meddra.org/files_acrobat/intguide_29_1_English.pdf>
  • LOINC. Version 2.83 released 2026-08-19. <https://loinc.org/> and <https://loinc.org/kb/loinc-release-notes>
  • LOINC monthly release plan. Targeted March 2027 launch; a future plan, not the current release cadence. <https://loinc.org/monthly>
  • CDC ICD-10-CM release files. FY26 April update service-date window and future FY27 effective date of 2026-10-01; do not equate downloadable with already applicable. <https://www.cdc.gov/nchs/icd/icd-10-cm/files.html>
  • UCUM specification. Formal grammar and semantics; the bundled regex is only a restricted character screen. <https://ucum.org/ucum>
  • SNOMED International licensing. Member/non-member use and licensing conditions. <https://www.snomed.org/licensing>
  • NLM SNOMED CT licensing. US distribution and licensing entry point. <https://www.nlm.nih.gov/healthit/snomedct/snomed_licensing.html>
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70## Ethics and professional publication guidance
72- **WMA Declaration of Helsinki.** Current official version adopted October 2024; previous versions superseded for current use. <https://www.wma.net/policies-post/wma-declaration-of-helsinki>
73- **ICMJE Recommendations.** Updated January 2026; authorship, accountability, participant protection, privacy, and publication practices. <https://www.icmje.org/icmje-recommendations.pdf>
74- **AMA Code of Medical Ethics Opinion 3.3.2 — Confidentiality & Electronic Medical Records.** Electronic-record confidentiality, access, audit, security, integrity, sharing, and disposition. <https://code-medical-ethics.ama-assn.org/ethics-opinions/confidentiality-electronic-medical-records>

Ethics and professional publication guidance

  • WMA Declaration of Helsinki. Current official version adopted October 2024; previous versions superseded for current use. <https://www.wma.net/policies-post/wma-declaration-of-helsinki>
  • ICMJE Recommendations. Updated January 2026; authorship, accountability, participant protection, privacy, and publication practices. <https://www.icmje.org/icmje-recommendations.pdf>
  • AMA Code of Medical Ethics Opinion 3.3.2 — Confidentiality & Electronic Medical Records. Electronic-record confidentiality, access, audit, security, integrity, sharing, and disposition. <https://code-medical-ethics.ama-assn.org/ethics-opinions/confidentiality-electronic-medical-records>
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76## Known source limitations
78- eCFR is continuously updated but identifies itself as an unofficial online edition; use the current official annual CFR and legal review when status matters.
79- ICH Step 4 documents require regional adoption/implementation review.
80- Controlled terminologies and professional standards can change after this ledger date. No licensed dictionary was downloaded or semantically validated.
81- ACR/BMJ direct access returned 403; current official public content was reviewed through extraction. ICH E2B catalogue returned only a page shell, so no claim of a current catalogue/Q&A revision is made.
82- The local successful statuses describe structure only; no patient records, production diagnostic reports, safety transmissions, or regulatory compliance were tested.
83- Journal instructions, local policies, protocols, SAPs, contracts, and ethics determinations are not captured here.

Known source limitations

  • eCFR is continuously updated but identifies itself as an unofficial online edition; use the current official annual CFR and legal review when status matters.
  • ICH Step 4 documents require regional adoption/implementation review.
  • Controlled terminologies and professional standards can change after this ledger date. No licensed dictionary was downloaded or semantically validated.
  • ACR/BMJ direct access returned 403; current official public content was reviewed through extraction. ICH E2B catalogue returned only a page shell, so no claim of a current catalogue/Q&A revision is made.
  • The local successful statuses describe structure only; no patient records, production diagnostic reports, safety transmissions, or regulatory compliance were tested.
  • Journal instructions, local policies, protocols, SAPs, contracts, and ethics determinations are not captured here.
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