advanced.md
452 lines · skills/qutip/references/advanced.md at 5f2bc03
QuTiP 5.3 Advanced Methods and Package Boundaries
Research and API verification date: 2026-10-01. Examples target qutip==5.3.1.
Specialized methods add assumptions and convergence parameters. Use them only when the physical model requires them.
Raw lines 1 to 8Bloch-Redfield
brmesolve derives dissipative dynamics from system coupling operators and bath noise-power spectra:
import numpy as np
from qutip import basis, brmesolve, sigmax, sigmaz
def bath_spectrum(w):
return 0.02 * w if w > 0.0 else 0.0
result = brmesolve(
0.5 * sigmaz(),
basis(2, 0),
np.linspace(0.0, 30.0, 601),
a_ops=[(sigmax(), bath_spectrum)],
e_ops={"z": sigmaz()},
sec_cutoff=0.1,
options={"atol": 1e-10, "rtol": 1e-8, "progress_bar": ""},
)Required assumptions:
- weak system-environment coupling (Born approximation);
- initially factorized system/bath state where the derivation requires it;
- bath correlations decay faster than system evolution (Markov approximation);
- stationary bath spectra with the correct angular-frequency and positive/negative-frequency convention;
- a justified secular or partial-secular cutoff.
sec_cutoff=-1 disables secularization. QuTiP's documentation warns that the non-secular equation may produce negativity. Inspect trace, Hermiticity, and minimum density-matrix eigenvalue through the entire run.
Environment objects can express thermal and fitted spectra more clearly than callbacks. When using a callback, test it over every transition frequency and near zero.
Raw lines 9 to 48Diffusive stochastic evolution
Use ssesolve for conditioned pure states and smesolve for density matrices:
result = smesolve(
H,
rho0,
tlist,
c_ops=unmonitored_channels,
sc_ops=monitored_channels,
heterodyne=False,
e_ops={"signal": measured_quadrature},
ntraj=300,
seeds=20260723,
options={
"dt": 0.001,
"store_measurement": "end",
"progress_bar": "",
},
)heterodyne=False selects homodyne and True selects heterodyne. Legacy integer noise selectors are stale.
Converge:
- stochastic integration
dt; - output grid;
- trajectory count;
- seed sensitivity;
- monitored efficiency/model choices;
- measurement timing (
"start"versus default end-of-step semantics when relevant).
SMESolver.run_from_experiment can replay known numeric noise or measurement records. Treat records as bounded numeric data; do not accept executable callbacks from untrusted configuration.
Non-Markovian Monte Carlo with time-local rates
nm_mcsolve is for time-local master equations whose decay rates can become negative. Its current input is a collection of operator/rate pairs, not a generic two-time bath-correlation callback:
import numpy as np
from qutip import basis, nm_mcsolve, sigmam, sigmaz
def rate(t):
return 0.1 * np.sin(t)
result = nm_mcsolve(
0.5 * sigmaz(),
basis(2, 0),
np.linspace(0.0, 5.0, 101),
[(sigmam(), rate)],
e_ops=[basis(2, 0).proj()],
ntraj=400,
seeds=20260723,
options={"progress_bar": ""},
)Here the integrated rate is 0.1 * (1 - cos(t)) >= 0, so the exact excited population exp(-0.1 * (1 - cos(t))) stays in [0, 1] even when the instantaneous rate becomes negative. A cosine rate instead would produce population above one after pi for this initially excited state.
This method does not make an arbitrary non-Markovian model valid. Verify that the time-local generator and influence-martingale construction apply, report sampling uncertainty, and audit completeness/positivity behavior.
Raw lines 89 to 122Floquet theory
For \(H(t+T)=H(t)\), the current QuTiP 5 abstraction is FloquetBasis:
import numpy as np
from qutip import FloquetBasis, QobjEvo, sigmax, sigmaz
drive_frequency = 2.0
period = 2.0 * np.pi / drive_frequency
def drive(t, amplitude, omega):
return amplitude * np.cos(omega * t)
H = QobjEvo(
[0.5 * sigmaz(), [sigmax(), drive]],
args={"amplitude": 0.2, "omega": drive_frequency},
)
floquet = FloquetBasis(H, period)
quasienergies = floquet.e_quasi
modes_at_zero = floquet.mode(0.0)Before using Floquet dynamics:
- numerically check
H(t + period) - H(t)over representative times; - state the quasi-energy branch convention;
- sweep Hilbert truncation and any precomputation grid;
- inspect near-degenerate quasi-energies;
- compare one-period propagation with direct evolution.
fsesolve handles closed periodic dynamics. fmmesolve handles a Floquet-Markov construction:
result = fmmesolve(
floquet,
rho0,
tlist,
c_ops=coupling_operators,
spectra_cb=spectrum_callbacks,
e_ops={"z": sigmaz()},
w_th=temperature,
)The coupling operators and spectrum callbacks are paired by position. They are not ordinary Lindblad channels. Spectrum callbacks must accept and return NumPy arrays (use np.where, not scalar if w > 0). Use FMESolver directly to sweep its kmax sideband cutoff and nT quadrature count. Verify weak-coupling, bath, and thermal assumptions. QuTiP 5 result states are in the lab basis by default; the store_floquet_states option controls additional Floquet-basis storage.
Old free-function mode workflows may remain for compatibility, but new work should use FloquetBasis.
HEOM
Import from the current namespace:
from qutip.solver.heom import DrudeLorentzBath, HEOMSolverThe legacy QuTiP 4 nonmarkov HEOM namespace is stale.
Example:
import numpy as np
from qutip import basis, sigmax, sigmaz
from qutip.solver.heom import DrudeLorentzBath, HEOMSolver
H_system = 0.5 * sigmaz()
rho0 = basis(2, 0).proj()
bath = DrudeLorentzBath(
sigmax(),
lam=0.05,
gamma=1.0,
T=0.5,
Nk=3,
)
solver = HEOMSolver(
H_system,
bath,
max_depth=4,
options={
"atol": 1e-10,
"rtol": 1e-8,
"store_states": True,
"store_ados": False,
"progress_bar": "",
},
)
result = solver.run(rho0, np.linspace(0.0, 10.0, 201))
reduced_states = result.statesFor arbitrary exponential expansions, the full current constructor is:
BosonicBath(Q, ck_real, vk_real, ck_imag, vk_imag,
combine=True, tag=None)Do not omit the imaginary coefficient/frequency lists; use empty lists only when the modeled correlation genuinely has no imaginary expansion.
HEOM convergence requires independent sweeps of:
- hierarchy
max_depth; - bath expansion count (
Nkor fitted exponent count); - Matsubara versus Padé/environment approximation;
- ODE tolerances/integrator;
- system Hilbert truncation;
- time grid and duration.
Record \(\lambda\), cutoff, temperature, and all energies in one consistent \(\hbar=k_B=1\) unit convention if that convention is used.
result.states are reduced system states. Set store_ados=True only when the full auxiliary-density hierarchy is needed; then result.ado_states can be large. A previous final ADO state may initialize a continuation only when its hierarchy is compatible. QuTiP 5.3.1 fixes final_ado_state to return the hierarchy object; it returns None when ADOs were not stored. Do not replace the full hierarchy with final_state when continuing correlated dynamics.
HEOM can mix supported bosonic and fermionic baths. Fermionic odd parity is a special solver construction and must match the initial operator parity.
Raw lines 180 to 254Permutational invariance (PIQS)
In QuTiP 5.3, use the piqs module exported by qutip:
import numpy as np
from qutip import mesolve, piqs
N = 10
Jz = piqs.jspin(N, "z", basis="dicke")
rho0 = piqs.dicke(N, N / 2, N / 2)
ensemble = piqs.Dicke(
N,
emission=0.05,
dephasing=0.01,
collective_emission=0.02,
)
L = ensemble.liouvillian()
result = mesolve(
L,
rho0,
np.linspace(0.0, 20.0, 201),
e_ops={"Jz": Jz},
)piqs.Dicke.pisolve(initial_state, tlist) is an optimized method only for diagonal Hamiltonians and diagonal initial density matrices. It takes no e_ops; use the general Liouvillian path for arbitrary observables and non-diagonal cases.
PIQS exploits permutation symmetry in a Dicke basis. Before using it:
- verify identical two-level constituents and permutation-symmetric dynamics;
- distinguish local and collective rates;
- keep operators and states in the same
dickeoruncoupledbasis; - do not interpret Dicke-basis matrix dimension as \(2^N\);
- compare with a small full-Hilbert-space model where feasible.
piqs.collapse_uncoupled returns ordinary collapse operators in a \(2^N\) space and is only practical for modest N.
Superoperators and channels
Current conversions:
from qutip import (
kraus_to_super,
operator_to_vector,
spre,
spost,
to_choi,
to_kraus,
to_super,
vector_to_operator,
)QuTiP column-stacks vectorized operators. Use the conversion functions rather than manual reshape logic. Check complete positivity and trace preservation in the intended representation, and preserve structured dimensions.
Raw lines 298 to 318QuTiP family packages
Official PyPI metadata snapshot:
| Distribution | Latest published | Release date | Maturity | Requires-Python | Required distributions |
|---|---|---|---|---|---|
qutip | 5.3.1 | 2026-08-04 | production/stable | >=3.11 | NumPy >=1.23.2; SciPy >=1.9.2 except 1.16.0/1.17.0; packaging |
qutip-qip | 0.4.2 | 2026-06-23 | production/stable | not declared | NumPy >=1.16.6; SciPy >=1.0; QuTiP >=4.6; packaging |
qutip-qtrl | 0.2.0 | 2026-06-23 | pre-alpha classifier | not declared | NumPy >=1.19; SciPy >=1.0; QuTiP >=5.0.1; packaging |
qutip-jax | 0.1.1 | 2025-05-29 | pre-alpha classifier | not declared | QuTiP >=5.1.0; JAX; Diffrax; Equinox |
qutip-cupy | no PyPI project | — | unreleased repository | — | no released metadata |
“Not declared” means the current PyPI Requires-Python field is empty, not that every Python release is supported. Resolve and test each extension in the same Python 3.11+ environment as QuTiP 5.3. Direct pins do not freeze transitive JAX/CuPy stacks; use a lockfile for a deployable environment.
qutip-qip 0.4.2
Status: production/stable on PyPI, released 2026-06-23.
Purpose:
- circuit and gate models;
QubitCircuitunitary circuit simulation;Processorpulse/noise/open-system device simulation.
Migration boundary:
from qutip_qip.circuit import QubitCircuitDo not import qutip.qip in QuTiP 5 code. This package is a local simulator, not a hardware provider or execution service.
qutip-qtrl 0.2.0
Status: latest published release 2026-06-23; PyPI classifier is pre-alpha.
Purpose: quantum optimal control with GRAPE and CRAB, emphasizing integration with QuTiP physics models.
Migration boundary:
from qutip_qtrl import pulseoptimIt replaces the old qutip.control import. It is not a trajectory viewer. For unitary control use pulseoptim.optimize_pulse_unitary(H_d, H_c, U_0, U_targ, num_tslots=..., evo_time=...). The Hamiltonian per slot is H_d + sum(amplitude[j] * H_c[j]); no implicit 2*pi conversion is added. With H_c=[sigmax()/2], a constant angular amplitude omega rotates by omega * evo_time. Recompute the ordered product of slot propagators from result.final_amps and np.diff(result.time), and compare it with result.evo_full_final. The equal-slot shortcut constructs float32 durations in 0.2.0, so replaying a fresh evo_time / num_tslots can differ. Supply an explicit float64 tau array when that precision matters. A PSU objective ignores global phase. Specify max_iter, max_wall_time, amplitude bounds and an intentional initial pulse; seeds= is not an optimizer argument. Random pulse initialization uses NumPy RNG state in this release.
Optimization success does not establish robustness: report bounds, objective, gradient/termination status, seeds, discretization, and validation under model uncertainty.
Raw lines 355 to 385qutip-jax 0.1.1
Status: latest published release 2025-05-29; explicitly pre-alpha and described as not ready for production use.
Purpose: a JAX linear-algebra data backend for GPU execution and automatic differentiation. It depends on QuTiP 5.1 or newer plus JAX, Diffrax, and Equinox.
Importing qutip_jax registers Qobj.to("jax"), "jaxdia", and the "diffrax" integrator. Select those explicitly; installing it alone does not move an ordinary solver to GPU. Avoid process-wide set_as_default() in shared applications. Diffrax controls tolerances through a diffrax.PIDController(atol=..., rtol=...) passed as options["stepsize_controller"], rather than ordinary solver atol/rtol.
CPU smoke tests used JAX/JAXlib 0.11.2, Diffrax 0.7.2 and Equinox 0.13.8. That is a tested snapshot, not compatibility with every future release or with another package's JAX pin. Check jax_enable_x64, actual device, JIT and gradients for the required operations against the native backend. GPU, MPI, and large-system scaling were not tested. Diffrax can emit its upstream complex-dtype warning; a small CPU agreement test does not establish every complex solve or derivative as correct.
qutip-cupy
The repository belongs to the QuTiP GitHub organization and implements a CuPy data backend, but:
- PyPI returns no
qutip-cupyproject; - the repository README says it is not officially released;
- the repository's installation text targets development-era QuTiP and is not a reproducible 5.3 release recipe.
Do not recommend it as a stable extension. If a user explicitly accepts an experimental source build, isolate and audit that separately rather than adding it to this pinned skill snapshot.
Raw lines 409 to 422Parallel and performance boundaries
mcsolve/stochastic solvers exposemap,num_cpus, and related options. Parallelism changes scheduling and cost, not the required trajectory convergence.parallel_mapexecutes Python callables. Use only trusted, statically defined local functions and bounded task lists.- Sparse matrices help only when operations preserve sparsity.
- Large HEOM, Liouvillian, dense diagonalization, and PIQS/full-space conversions can grow rapidly. Estimate dimensions and memory before construction.
- QuTiP 5.3's
matrix_formoption formesolveand new Krylov density-matrix support are performance choices that require output equivalence tests.
Sources (verified 2026-10-01)
- Bloch-Redfield guide
- Stochastic solver guide
- Floquet API
- HEOM API
- PIQS API
- QuTiP 5.3.1 release
- qutip-qip 0.4.2
- QIP circuit and device API
- QTRL 0.2.0 pulse API source
- QTRL 0.2.0 slot construction
- JAX solver guide
- JAX 0.1.1 integrator source
- qutip-qtrl 0.2.0
- qutip-jax 0.1.1
- official qutip-cupy repository