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qutip

skill · 349 lines · MIT · skills/qutip/SKILL.md

The facts

Its description

Simulate and audit closed and open quantum-system models with QuTiP 5, including deterministic, trajectory, steady-state, spectral, and phase-space workflows. Use for local quantum-dynamics work where physical assumptions, dimensions, and numerical convergence must be explicit.

The description the agent reads to decide when to use it.

From its settingsline 3

Runs scripts

scripts/qobj_model_validator.py, scripts/two_level_simulation.py, scripts/solver_config_planner.py, scripts/convergence_sweep.py, scripts/result_audit.py (first 5 of 9 lines)

Scripts the text names. Found by matching words, so treat them as pointers.

Found by matching wordsline 278 line 279 line 280 line 281 line 282

Files it mentions

references/core_concepts.md, references/time_evolution.md, references/visualization.md, references/analysis.md, references/advanced.md (first 5 of 16 lines)

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Found by matching wordsline 113 line 192 line 245 line 250 line 266

Licence

MIT, from the skill file

The terms its author shares it under, which let it be shown here.

From its settingsline 4 licence text

Other settings

compatibility: Requires Python 3.11+, uv, and qutip==5.3.1 for executable simulations. Bundled planners and all script help run with the Python standard library; plotting requires the graphics extra. No network service or credentials are used. metadata: version: "1.4" skill-author: K-Dense Inc. last-reviewed: "2026-10-01"

More settings at the top of the file, shown as written.

From its settingsline 5 line 6
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1---
2name: qutip
3description: Simulate and audit closed and open quantum-system models with QuTiP 5, including deterministic, trajectory, steady-state, spectral, and phase-space workflows. Use for local quantum-dynamics work where physical assumptions, dimensions, and numerical convergence must be explicit.
4license: MIT
5compatibility: Requires Python 3.11+, uv, and qutip==5.3.1 for executable simulations. Bundled planners and all script help run with the Python standard library; plotting requires the graphics extra. No network service or credentials are used.
6metadata:
7 version: "1.4"
8 skill-author: K-Dense Inc.
9 last-reviewed: "2026-10-01"
10---
12# QuTiP 5
14## Scope
16Use QuTiP for finite-dimensional quantum mechanics, quantum optics, Lindblad
17dynamics, trajectories, weak-coupling Bloch-Redfield models, and specialized
18Floquet, HEOM, and permutational-invariance methods. It is not a hardware
19execution SDK. Circuit and control functionality moved to separate QuTiP family
20packages.
22This skill targets **QuTiP 5.3.1**, released 2026-08-04. QuTiP 5.3 requires
23Python 3.11 or newer. Its required distributions are NumPy (`>=1.23.2`), SciPy
24(`>=1.9.2`, excluding `1.16.0` and `1.17.0`), and `packaging`.

Scope

Use QuTiP for finite-dimensional quantum mechanics, quantum optics, Lindblad dynamics, trajectories, weak-coupling Bloch-Redfield models, and specialized Floquet, HEOM, and permutational-invariance methods. It is not a hardware execution SDK. Circuit and control functionality moved to separate QuTiP family packages.

This skill targets QuTiP 5.3.1, released 2026-08-04. QuTiP 5.3 requires Python 3.11 or newer. Its required distributions are NumPy (>=1.23.2), SciPy (>=1.9.2, excluding 1.16.0 and 1.17.0), and packaging.

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26## Reproducible uv snapshot
28Create a dedicated environment and pin every direct distribution:
30```bash
31uv venv --python 3.11
32uv pip install "qutip==5.3.1"
33```
35For plots:
37```bash
38uv pip install "qutip[graphics]==5.3.1"
39```
41Optional QuTiP family packages are independently versioned:
43```bash
44uv pip install "qutip-qip==0.4.2"
45uv pip install "qutip-qtrl==0.2.0"
46uv pip install "qutip-jax==0.1.1"
47```
49- `qutip-qip` 0.4.2 (2026-06-23) is the production/stable circuit, gate, and
50 noisy-device simulation package. Import from `qutip_qip`, not `qutip.qip`.
51- `qutip-qtrl` 0.2.0 (2026-06-23) provides GRAPE and CRAB **quantum optimal
52 control**. It is not a trajectory viewer. Import from `qutip_qtrl`, not
53 `qutip.control`; PyPI still classifies it pre-alpha.
54- `qutip-jax` 0.1.1 (2025-05-29) is the official JAX data backend for GPU and
55 automatic-differentiation experiments. It is explicitly pre-alpha.
56- `qutip-cupy` is an official QuTiP-organization repository, but it has no PyPI
57 release and its own README says it is not officially released. Do not put an
58 unreleased Git install into a reproducible workflow.
60Use a project lockfile or a hash-generating `uv pip compile` workflow when
61transitive dependency identity must also be frozen.
63Core tests cover small native CPU systems with known solutions. Optional JAX
64checks cover CPU conversion/evolution and differentiation only; GPU/MPI,
65large HEOM hierarchies, and experimentally realistic physics are unvalidated.
66Snippets with placeholders such as `H`, `rho0`, or `c_ops` are illustrative
67fragments to adapt after defining a consistent model.

Reproducible uv snapshot

Create a dedicated environment and pin every direct distribution:

uv venv --python 3.11
uv pip install "qutip==5.3.1"

For plots:

uv pip install "qutip[graphics]==5.3.1"

Optional QuTiP family packages are independently versioned:

uv pip install "qutip-qip==0.4.2"
uv pip install "qutip-qtrl==0.2.0"
uv pip install "qutip-jax==0.1.1"
  • qutip-qip 0.4.2 (2026-06-23) is the production/stable circuit, gate, and noisy-device simulation package. Import from qutip_qip, not qutip.qip.
  • qutip-qtrl 0.2.0 (2026-06-23) provides GRAPE and CRAB quantum optimal control. It is not a trajectory viewer. Import from qutip_qtrl, not qutip.control; PyPI still classifies it pre-alpha.
  • qutip-jax 0.1.1 (2025-05-29) is the official JAX data backend for GPU and automatic-differentiation experiments. It is explicitly pre-alpha.
  • qutip-cupy is an official QuTiP-organization repository, but it has no PyPI release and its own README says it is not officially released. Do not put an unreleased Git install into a reproducible workflow.

Use a project lockfile or a hash-generating uv pip compile workflow when transitive dependency identity must also be frozen.

Core tests cover small native CPU systems with known solutions. Optional JAX checks cover CPU conversion/evolution and differentiation only; GPU/MPI, large HEOM hierarchies, and experimentally realistic physics are unvalidated. Snippets with placeholders such as H, rho0, or c_ops are illustrative fragments to adapt after defining a consistent model.

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69## Non-negotiable model contract
71Before solving, record:
731. **Units and convention.** QuTiP equations normally set \(\hbar=1\).
74 Hamiltonian entries are angular frequencies and rates have reciprocal-time
75 units. A decay rate specified as `1/T1` needs no `2*pi` factor. Convert
76 cyclic frequency with \(2\pi f\); never mix Hz and rad/s.
772. **Subsystem order.** `tensor(A, B, C)` fixes subsystem indices `0, 1, 2`.
78 Preserve that order in every state, operator, collapse channel, and partial
79 trace. `obj.ptrace([0, 2])` keeps those subsystems; it does not trace them.
803. **State validity.** Check ket norm or density-matrix Hermiticity, unit trace,
81 and eigenvalues above a stated negative tolerance. Tiny negative values may
82 be numerical; material negativity invalidates a claimed state.
834. **Generator meaning.** A Lindblad channel with rate `gamma` is represented
84 by `sqrt(gamma) * A`, not `gamma * A`. Define what each rate measures. For
85 example, `sqrt(gamma_phi / 2) * sigmaz()` gives coherence decay
86 `exp(-gamma_phi * t)`.
875. **Approximations.** State rotating-wave, Born-Markov, secular, weak-coupling,
88 bath-equilibrium, truncation, symmetry, and initial-factorization assumptions
89 wherever used.
906. **Numerics.** Justify Hilbert truncation, output grid, integration method,
91 tolerances, trajectory count, and random seeds. Report `result.stats`.
927. **Convergence.** Sweep every artificial cutoff: Fock dimension, time/frequency
93 window and spacing, ODE tolerances, trajectories, Floquet harmonics, HEOM
94 depth and bath exponents, or PIQS representation as applicable.

Non-negotiable model contract

Before solving, record:

  1. Units and convention. QuTiP equations normally set \(\hbar=1\). Hamiltonian entries are angular frequencies and rates have reciprocal-time units. A decay rate specified as 1/T1 needs no 2*pi factor. Convert cyclic frequency with \(2\pi f\); never mix Hz and rad/s.
  2. Subsystem order. tensor(A, B, C) fixes subsystem indices 0, 1, 2. Preserve that order in every state, operator, collapse channel, and partial trace. obj.ptrace([0, 2]) keeps those subsystems; it does not trace them.
  3. State validity. Check ket norm or density-matrix Hermiticity, unit trace, and eigenvalues above a stated negative tolerance. Tiny negative values may be numerical; material negativity invalidates a claimed state.
  4. Generator meaning. A Lindblad channel with rate gamma is represented by sqrt(gamma) * A, not gamma * A. Define what each rate measures. For example, sqrt(gamma_phi / 2) * sigmaz() gives coherence decay exp(-gamma_phi * t).
  5. Approximations. State rotating-wave, Born-Markov, secular, weak-coupling, bath-equilibrium, truncation, symmetry, and initial-factorization assumptions wherever used.
  6. Numerics. Justify Hilbert truncation, output grid, integration method, tolerances, trajectory count, and random seeds. Report result.stats.
  7. Convergence. Sweep every artificial cutoff: Fock dimension, time/frequency window and spacing, ODE tolerances, trajectories, Floquet harmonics, HEOM depth and bath exponents, or PIQS representation as applicable.
Raw lines 69 to 95
96## Qobj, dimensions, and tensor order
98Prefer explicit imports and inspect both shape and structured dimensions:
100```python
101from qutip import basis, qeye, sigmaz, tensor
103psi = tensor(basis(2, 0), basis(3, 1))
104z_on_first = tensor(sigmaz(), qeye(3))
106assert psi.shape == (6, 1)
107assert psi.dims == [[2, 3], [1]]
108assert z_on_first.dims == [[2, 3], [2, 3]]
109rho_first = psi.proj().ptrace(0) # keep subsystem 0
110```
112Matrix shape alone is insufficient: two objects can both be 6-by-6 but encode
113different tensor factorizations. Read `references/core_concepts.md` before
114building composite, superoperator, or channel models.

Qobj, dimensions, and tensor order

Prefer explicit imports and inspect both shape and structured dimensions:

from qutip import basis, qeye, sigmaz, tensor

psi = tensor(basis(2, 0), basis(3, 1))
z_on_first = tensor(sigmaz(), qeye(3))

assert psi.shape == (6, 1)
assert psi.dims == [[2, 3], [1]]
assert z_on_first.dims == [[2, 3], [2, 3]]
rho_first = psi.proj().ptrace(0)  # keep subsystem 0

Matrix shape alone is insufficient: two objects can both be 6-by-6 but encode different tensor factorizations. Read references/core_concepts.md before building composite, superoperator, or channel models.

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Reads a file references/core_concepts.md :113
116## Choose the solver by physics
118| Model | Current API | Required justification |
119|---|---|---|
120| Closed, pure, unitary | `sesolve` | Hermitian Hamiltonian; no dissipation |
121| Lindblad/open or mixed | `mesolve` | Markovian completely positive model and channel rates |
122| Quantum jumps | `mcsolve` | Unravelling, trajectory convergence, seeds |
123| Microscopic weak bath | `brmesolve` | Born-Markov/weak coupling, spectra, secular choice |
124| Diffusive measurement | `ssesolve`, `smesolve` | monitored versus unmonitored channels |
125| Periodic drive | `FloquetBasis`, `fsesolve`, `fmmesolve` | verified period and Floquet convergence |
126| Structured non-Markovian bath | `qutip.solver.heom` | bath expansion and hierarchy convergence |
127| Symmetric spin ensemble | `qutip.piqs` | permutation symmetry and basis choice |
129Do not select a more specialized solver merely because it exists.

Choose the solver by physics

ModelCurrent APIRequired justification
Closed, pure, unitarysesolveHermitian Hamiltonian; no dissipation
Lindblad/open or mixedmesolveMarkovian completely positive model and channel rates
Quantum jumpsmcsolveUnravelling, trajectory convergence, seeds
Microscopic weak bathbrmesolveBorn-Markov/weak coupling, spectra, secular choice
Diffusive measurementssesolve, smesolvemonitored versus unmonitored channels
Periodic driveFloquetBasis, fsesolve, fmmesolveverified period and Floquet convergence
Structured non-Markovian bathqutip.solver.heombath expansion and hierarchy convergence
Symmetric spin ensemblequtip.piqspermutation symmetry and basis choice

Do not select a more specialized solver merely because it exists.

Raw lines 116 to 130
131## Deterministic open-system example
133QuTiP 5.3 uses ordinary option dictionaries. `e_ops`, `args`, and
134`options` are keyword-only; the old mutable options object is gone.
136```python
137import numpy as np
138from qutip import basis, mesolve, sigmam, sigmaz
140omega = 2.0
141gamma = 0.15
142tlist = np.linspace(0.0, 20.0, 401)
143excited = basis(2, 0)
145result = mesolve(
146 0.5 * omega * sigmaz(),
147 excited,
148 tlist,
149 c_ops=[np.sqrt(gamma) * sigmam()],
150 e_ops={"sigma_z": sigmaz(), "excited": excited.proj()},
151 options={
152 "method": "adams",
153 "atol": 1e-10,
154 "rtol": 1e-8,
155 "store_final_state": True,
156 "normalize_output": False,
157 "progress_bar": "",
158 },
161population = np.asarray(result.e_data["excited"])
162assert np.max(np.abs(population - np.exp(-gamma * tlist))) < 2e-6
163assert isinstance(result.stats, dict)
164```
166If the problem is stiff, compare `bdf` or `lsoda`; do not change an integrator
167without rerunning tolerance and invariant checks. QuTiP 5.3 also supports
168`options={"matrix_form": True}` in `mesolve`; benchmark and validate it before
169using it as a default.

Deterministic open-system example

QuTiP 5.3 uses ordinary option dictionaries. e_ops, args, and options are keyword-only; the old mutable options object is gone.

import numpy as np
from qutip import basis, mesolve, sigmam, sigmaz

omega = 2.0
gamma = 0.15
tlist = np.linspace(0.0, 20.0, 401)
excited = basis(2, 0)

result = mesolve(
    0.5 * omega * sigmaz(),
    excited,
    tlist,
    c_ops=[np.sqrt(gamma) * sigmam()],
    e_ops={"sigma_z": sigmaz(), "excited": excited.proj()},
    options={
        "method": "adams",
        "atol": 1e-10,
        "rtol": 1e-8,
        "store_final_state": True,
        "normalize_output": False,
        "progress_bar": "",
    },
)

population = np.asarray(result.e_data["excited"])
assert np.max(np.abs(population - np.exp(-gamma * tlist))) < 2e-6
assert isinstance(result.stats, dict)

If the problem is stiff, compare bdf or lsoda; do not change an integrator without rerunning tolerance and invariant checks. QuTiP 5.3 also supports options={"matrix_form": True} in mesolve; benchmark and validate it before using it as a default.

Raw lines 131 to 170
171## Time-dependent systems
173Prefer trusted Pythonic callables or numeric coefficient arrays. Do not create
174coefficient source strings from user input.
176```python
177import numpy as np
178from qutip import QobjEvo, sigmax, sigmaz
180def envelope(t, amplitude, center, width):
181 return amplitude * np.exp(-0.5 * ((t - center) / width) ** 2)
183H = QobjEvo(
184 [0.5 * sigmaz(), [sigmax(), envelope]],
185 args={"amplitude": 0.2, "center": 5.0, "width": 1.0},
187instantaneous_H = H(5.0)
188H.arguments(amplitude=0.1)
189```
191The older `f(t, args)` coefficient signature is deprecated in 5.3 and is
192scheduled for removal in 5.5. See `references/time_evolution.md`.
194For narrow pulses, the output `tlist` is not the adaptive integrator’s internal
195step schedule. Bound the solver’s `max_step` below half the narrowest pulse width,
196then reduce it further to check convergence of the pulse response. Tight
197relative/absolute tolerances alone can still miss a pulse sampled only in an
198idle region. See the [QuTiP solver options](https://qutip.readthedocs.io/en/qutip-5.3.x/apidoc/solver.html).

Time-dependent systems

Prefer trusted Pythonic callables or numeric coefficient arrays. Do not create coefficient source strings from user input.

import numpy as np
from qutip import QobjEvo, sigmax, sigmaz

def envelope(t, amplitude, center, width):
    return amplitude * np.exp(-0.5 * ((t - center) / width) ** 2)

H = QobjEvo(
    [0.5 * sigmaz(), [sigmax(), envelope]],
    args={"amplitude": 0.2, "center": 5.0, "width": 1.0},
)
instantaneous_H = H(5.0)
H.arguments(amplitude=0.1)

The older f(t, args) coefficient signature is deprecated in 5.3 and is scheduled for removal in 5.5. See references/time_evolution.md.

For narrow pulses, the output tlist is not the adaptive integrator’s internal step schedule. Bound the solver’s max_step below half the narrowest pulse width, then reduce it further to check convergence of the pulse response. Tight relative/absolute tolerances alone can still miss a pulse sampled only in an idle region. See the QuTiP solver options.

Raw lines 171 to 199
200## Trajectories and stochastic solvers
202```python
203import numpy as np
204from qutip import basis, mcsolve, sigmam, sigmaz
206tlist = np.linspace(0.0, 10.0, 201)
207result = mcsolve(
208 0.5 * sigmaz(),
209 basis(2, 0),
210 tlist,
211 [np.sqrt(0.2) * sigmam()],
212 e_ops=[basis(2, 0).proj()],
213 ntraj=400,
214 seeds=20260723,
215 options={"keep_runs_results": False, "progress_bar": ""},
217```
219Report `ntraj`, `result.seeds`, uncertainty or repeated-seed sensitivity, and
220whether individual runs were retained. Reuse `seeds=previous_result.seeds` only
221when paired trajectories are intentional. `ssesolve` and `smesolve` use the
222boolean `heterodyne` argument, not legacy integer noise codes.

Trajectories and stochastic solvers

import numpy as np
from qutip import basis, mcsolve, sigmam, sigmaz

tlist = np.linspace(0.0, 10.0, 201)
result = mcsolve(
    0.5 * sigmaz(),
    basis(2, 0),
    tlist,
    [np.sqrt(0.2) * sigmam()],
    e_ops=[basis(2, 0).proj()],
    ntraj=400,
    seeds=20260723,
    options={"keep_runs_results": False, "progress_bar": ""},
)

Report ntraj, result.seeds, uncertainty or repeated-seed sensitivity, and whether individual runs were retained. Reuse seeds=previous_result.seeds only when paired trajectories are intentional. ssesolve and smesolve use the boolean heterodyne argument, not legacy integer noise codes.

Raw lines 200 to 223
224## Steady states, spectra, and phase space
226```python
227import numpy as np
228from qutip import QFunc, liouvillian, operator_to_vector, qfunc, steadystate
230rho_ss = steadystate(H, c_ops, method="direct")
231residual = (liouvillian(H, c_ops) * operator_to_vector(rho_ss)).norm()
232assert residual < 1e-9
234xvec = np.linspace(-5.0, 5.0, 151)
235Q_once = qfunc(rho_ss, xvec, xvec)
236q_many = QFunc(xvec, xvec)
237Q_again = q_many(rho_ss)
238assert Q_once.shape == (len(xvec), len(xvec))
239```
241For `wigner`, `qfunc`, and `QFunc`, array element `[j, k]` corresponds to
242`yvec[j]`, `xvec[k]`. In QuTiP 5.3, `QFunc` is initialized with fixed
243coordinates and called with a state; it has no `.eval` method. This skill never
244uses Python dynamic-code execution. Prefer `plot_wigner`, `Result.plot_expect`,
245or explicit Matplotlib axes as documented in `references/visualization.md`.
247Direct `spectrum` is a stationary steady-state spectrum. An FFT of a finite
248correlation requires explicit checks for tail decay, timestep aliasing,
249frequency resolution, window sensitivity, and transform convention. See

Steady states, spectra, and phase space

import numpy as np
from qutip import QFunc, liouvillian, operator_to_vector, qfunc, steadystate

rho_ss = steadystate(H, c_ops, method="direct")
residual = (liouvillian(H, c_ops) * operator_to_vector(rho_ss)).norm()
assert residual < 1e-9

xvec = np.linspace(-5.0, 5.0, 151)
Q_once = qfunc(rho_ss, xvec, xvec)
q_many = QFunc(xvec, xvec)
Q_again = q_many(rho_ss)
assert Q_once.shape == (len(xvec), len(xvec))

For wigner, qfunc, and QFunc, array element [j, k] corresponds to yvec[j], xvec[k]. In QuTiP 5.3, QFunc is initialized with fixed coordinates and called with a state; it has no .eval method. This skill never uses Python dynamic-code execution. Prefer plot_wigner, Result.plot_expect, or explicit Matplotlib axes as documented in references/visualization.md.

Direct spectrum is a stationary steady-state spectrum. An FFT of a finite correlation requires explicit checks for tail decay, timestep aliasing, frequency resolution, window sensitivity, and transform convention. See references/analysis.md.

Raw lines 224 to 251
Reads a file references/visualization.md :245
Reads a file references/analysis.md :250
252## Advanced boundaries
254- Import HEOM from `qutip.solver.heom`; the legacy QuTiP 4 nonmarkov HEOM
255 namespace is stale.
256- Use `FloquetBasis` for modes and quasi-energies. Verify
257 `H(t + T) == H(t)` numerically and sweep basis/truncation choices.
258- Access PIQS with `from qutip import piqs`. `Dicke.pisolve` is only the
259 optimized diagonal-state/diagonal-Hamiltonian route; general Dicke-basis
260 dynamics use the Liouvillian with `mesolve`.
261- `brmesolve` can violate positivity, especially without secularization. Check
262 density-matrix eigenvalues over time.
263- QIP and optimal control are extension-package concerns. Never present local
264 simulation as quantum-hardware execution.
266See `references/advanced.md` for HEOM, Floquet, PIQS, stochastic, and extension
267boundaries.

Advanced boundaries

  • Import HEOM from qutip.solver.heom; the legacy QuTiP 4 nonmarkov HEOM namespace is stale.
  • Use FloquetBasis for modes and quasi-energies. Verify H(t + T) == H(t) numerically and sweep basis/truncation choices.
  • Access PIQS with from qutip import piqs. Dicke.pisolve is only the optimized diagonal-state/diagonal-Hamiltonian route; general Dicke-basis dynamics use the Liouvillian with mesolve.
  • brmesolve can violate positivity, especially without secularization. Check density-matrix eigenvalues over time.
  • QIP and optimal control are extension-package concerns. Never present local simulation as quantum-hardware execution.

See references/advanced.md for HEOM, Floquet, PIQS, stochastic, and extension boundaries.

Raw lines 252 to 268
Reads a file references/advanced.md :266
269## Safe local CLIs
271All bundled tools are local-only, emit strict JSON, reject non-finite JSON,
272and never load pickle files or executable model code. The model-input validator
273also rejects unknown keys; result audits check their documented report fields. Simulation
274imports are lazy, so every `--help` works without QuTiP installed.
276| Script | Purpose |
277|---|---|
278| `scripts/qobj_model_validator.py` | Validate bounded Qobj model JSON, dimensions, states, rates, and role compatibility |
279| `scripts/two_level_simulation.py` | Run a bounded two-level Lindblad or jump simulation |
280| `scripts/solver_config_planner.py` | Select a current solver and option/checklist plan |
281| `scripts/convergence_sweep.py` | Sweep tolerances/grid size or trajectory count on a synthetic model |
282| `scripts/result_audit.py` | Audit JSON output without deserializing Python objects |
283| `scripts/steady_state_spectrum_planner.py` | Plan bounded steady-state and direct/FFT spectral checks |
285Example:
287```bash
288python skills/qutip/scripts/two_level_simulation.py --help
289python skills/qutip/scripts/two_level_simulation.py \
290 --decay-rate 0.2 --t-final 10 --time-points 201 \
291 --output two-level.json
292python skills/qutip/scripts/result_audit.py two-level.json
293```

Safe local CLIs

All bundled tools are local-only, emit strict JSON, reject non-finite JSON, and never load pickle files or executable model code. The model-input validator also rejects unknown keys; result audits check their documented report fields. Simulation imports are lazy, so every --help works without QuTiP installed.

ScriptPurpose
scripts/qobj_model_validator.pyValidate bounded Qobj model JSON, dimensions, states, rates, and role compatibility
scripts/two_level_simulation.pyRun a bounded two-level Lindblad or jump simulation
scripts/solver_config_planner.pySelect a current solver and option/checklist plan
scripts/convergence_sweep.pySweep tolerances/grid size or trajectory count on a synthetic model
scripts/result_audit.pyAudit JSON output without deserializing Python objects
scripts/steady_state_spectrum_planner.pyPlan bounded steady-state and direct/FFT spectral checks

Example:

python skills/qutip/scripts/two_level_simulation.py --help
python skills/qutip/scripts/two_level_simulation.py \
  --decay-rate 0.2 --t-final 10 --time-points 201 \
  --output two-level.json
python skills/qutip/scripts/result_audit.py two-level.json
Raw lines 269 to 294
Reads a file scripts/result_audit.py :282
Runs code python skills/qutip/scripts/two_level_simulation.py :288
Runs code python skills/qutip/scripts/result_audit.py :292
295## Completion checklist
297- Record units, \(\hbar\), tensor order, initial state, channels, and model
298 assumptions.
299- Validate Hermiticity, norm/trace, positivity, dimensions, and generator units.
300- Pin QuTiP and direct extensions; record platform, Python, NumPy, and SciPy.
301- Inspect result options and stats; do not assume states were stored.
302- Perform cutoff, grid, tolerance/integrator, and stochastic convergence sweeps.
303- Save portable numeric/configuration summaries as JSON or text. Do not load
304 untrusted QuTiP object/result files because object serialization can execute
305 code.

Completion checklist

  • Record units, \(\hbar\), tensor order, initial state, channels, and model assumptions.
  • Validate Hermiticity, norm/trace, positivity, dimensions, and generator units.
  • Pin QuTiP and direct extensions; record platform, Python, NumPy, and SciPy.
  • Inspect result options and stats; do not assume states were stored.
  • Perform cutoff, grid, tolerance/integrator, and stochastic convergence sweeps.
  • Save portable numeric/configuration summaries as JSON or text. Do not load untrusted QuTiP object/result files because object serialization can execute code.
Raw lines 295 to 306
307## References
309- `references/core_concepts.md` — Qobj, dimensions, tensor products, states,
310 channels, and unit conventions
311- `references/time_evolution.md` — current solver signatures, options, results,
312 QobjEvo, trajectories, and numerical controls
313- `references/analysis.md` — physical-state audits, steady states,
314 correlations, spectra, and convergence
315- `references/visualization.md` — Wigner, Q functions, `QFunc`, Bloch, result,
316 and matrix plots
317- `references/advanced.md` — Bloch-Redfield, stochastic, Floquet, HEOM, PIQS,
318 and QuTiP family package boundaries

References

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320## Dated official sources
322Verified **2026-10-01**:
324- [QuTiP 5.3.1 PyPI metadata](https://pypi.org/project/qutip/)
325- [QuTiP 5.3.1 release](https://github.com/qutip/qutip/releases/tag/v5.3.1)
326- [QuTiP 5.3 changelog](https://qutip.readthedocs.io/en/stable/changelog.html)
327- [QuTiP 5.3 API](https://qutip.readthedocs.io/en/stable/apidoc/apidoc.html)
328- [QuTiP version-5 tutorials](https://github.com/qutip/qutip-tutorials/tree/main/tutorials-v5)
329- [qutip-qip PyPI](https://pypi.org/project/qutip-qip/)
330- [qutip-qtrl PyPI](https://pypi.org/project/qutip-qtrl/)
331- [qutip-jax PyPI](https://pypi.org/project/qutip-jax/)
332- [official unreleased qutip-cupy repository](https://github.com/qutip/qutip-cupy)
Boilerplate, lines 334 to 349. The same text appears in 125 other files here. Close
334## Citing Scientific Agent Skills
336This skill is part of Scientific Agent Skills by K-Dense. If it materially contributed to a
337manuscript, report, presentation, or code release, add the paper to the references or
338software section and tell the user you did so:
340> Kassis, T., Agarwal, V., He, Y., Patel, D., & Brueckner, A. M. (2026). Scientific Agent
341> Skills: A Library of Procedural Knowledge for Research Agents. arXiv:2609.00065.
342> https://doi.org/10.48550/arXiv.2609.00065
344Always cite the current version. The DOI and https://arxiv.org/abs/2609.00065 resolve to the
345latest arXiv version, so never append a version suffix such as `v1`. When network access is
346available, fetch https://arxiv.org/abs/2609.00065 (or
347http://export.arxiv.org/api/query?id_list=2609.00065) before writing the reference and take
348the author list, year, and version from that record. If the record lists a journal reference
349or publisher DOI, cite the published version instead.

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